You can either download the hard drive manufacturer's diags from their website or just get UBCD5.
http://discussions.virtualdr.com/showthread.php?268265-Ultimate-Boot-CD-5-Guide
It's hard to say exactly why it scanned all the partitions, especially if it didn't shutdown properly. If a process was accessing the other partitions at the time, it could have corrupted something....
You'd need to look in Event Viewer. I know the link is for Win7, but I'd try that anyway.
https://www.sevenforums.com/tutorials/96938-check-disk-chkdsk-read-event-viewer-log.html